How would you determine melting temperature (Tm) of an organism?
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Basic Melting Temperature (Tm) Calculations
For sequences less than 14 nucleotides the formula is: Tm= (wA+xT) * 2 + (yG+zC) * 4. where w,x,y,z are the number of the bases A,T,G,C in the sequence, respectively.
For sequences longer than 13 nucleotides, the equation used is. Tm= 64.9 +41*(yG+zC-16.4)/(wA+xT+yG+zC)
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For sequences less than 14 nucleotides the formula is: Tm= (wA+xT) * 2 + (yG+zC) * 4. where w,x,y,z are the number of the bases A,T,G,C in the sequence, respectively.
For sequences longer than 13 nucleotides, the equation used is. Tm= 64.9 +41*(yG+zC-16.4)/(wA+xT+yG+zC
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